Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802539.1_cds_XP_016479830.1_7094
CDS Infomation

[gene=LOC107801073] [db_xref=GeneID:107801073] [protein=long chain base biosynthesis protein 1-like] [protein_id=XP_016479830.1] [location=join(3173..3287,3423..3517,4413..4504,5301..5394,5472..5544,5642..5774,5977..6151,6273..6413,6503..6598,6711..6852,6925..7052,7153..7329)] [gbkey=CDS]
Sequence

ATGGATGCAACAATATCAGTTGTTACAAATACGTTGAGAGATGCATCTGATTGGGTGACG
TGGATATCCGAGGCTCCATTTGCAAGAGCTGTGGTGTTTGGAGTTAACATTGGAGGGCAT
CTATTTGTGGAGGGTCTTCTCCTTGTAGTCATTCTTTTCCTACTATCGCAGAAAAGTTAT
AAACCACCTAAAAGACCATTGACAAAGAAGGAAATAGATGAGCTATGTGATGAATGGGTC
CCAGAACCTCTTATTCCCACCATTACAGATGAGATGAAATCGGAGCCTCCAGTACTTGAA
AGCGCTGCAGCTCCTCATACAATTGTTAATGGCAAGGAAGTAGTAAATTTTACTTCAGCC
AATTACCTTGGATTATTAGGAAATGAAAAGTTACTTGAGACATGCACCAGGGCGTTGGAG
AAATATGGAGTAGGTTCTTGTGGTCCTCGTGGATTTTATGGAACAATTGATGTTCACCTT
GATTGTGAGGCCAGGATAGCTAAGTTTCTTGGGACTCCTGATTCTATACTCTACTCTTAT
GGGCTTTCTACCATGTTCAGTGCAATTCCAGCATTTTGCAAGAAGGGAGATGTCATTGTT
GCGGATGAAGGTGTCCATTGGGGAATACAAAATGGACTTCAGCTCTCTAGAAGTACAATC
ATATACTTCAAGCACAATGATATGGAGTCCTTGAGAAATACATTAGAGAAAATCACTCAA
GAAAACAAGCGAGCTAAAAAACTTAGGCGATATATTGTTGTTGAAGCAGTATATCAGAAT
TCTGGTCAAGTCGCTCCATTGGATGAGATCATCAAACTGAAGGAAAAATACAGGTTCCGG
GTATTGTTGGATGAAAGCAATTCCTTGGGTGTGCTTGGCGGCTCCGGTAAAGGTCTAACA
GAACATTGCAATGTTCCGGTCGACAAGATAGATATCATTATTGCTGCCATGGGACATGCA
TTGGCCACAGAAGGAGGATTTTGCACCGGGAGTACAAGAGTCATTGACCACCAGCGCCTC
AGTAGTTCTGGTTACGTGTTTTCTGCTTCTTTGCCTCCATATCTAGCAAGTGCTGCAATC
AAAGCCTTTGATATCCTGGAAGAAAATCCTGACCTTATCACAAAATTGAGGGAAAACATT
AAGATGCTGTTTAAAGATCTATCCGATATTAAAGGGCTGGAAATAGTGAGTGATCCACTC
TCTCCCATAGTTTTTCTAAGACTAAAGAAGTCCACGGGTTCCTCAAACAGTGACCTAAAA
CTGCTAGAAGATATCGCGGATCGTGTATTGAAGGAAGATTCTGTTTTTGTGGTCACTTCA
AAGAGATCGACACTTGATAAATGTAAGTTGCCAGTGGGGCTTCGATTGTTTGTCTCAGCA
GGGCACTCAGAATCTGATATGAAGAAAGCTAGTGAATCATTGAAGAGAGTCGCGGCTTCA
CTATTGACAGATCAGAGCTAG

Peptide Sequence

PEP ID

XP_016479830.1
PEP Infomation

PREDICTED: long chain base biosynthesis protein 1-like [Nicotiana tabacum]
Sequence

MDATISVVTNTLRDASDWVTWISEAPFARAVVFGVNIGGHLFVEGLLLVVILFLLSQKSY
KPPKRPLTKKEIDELCDEWVPEPLIPTITDEMKSEPPVLESAAAPHTIVNGKEVVNFTSA
NYLGLLGNEKLLETCTRALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSY
GLSTMFSAIPAFCKKGDVIVADEGVHWGIQNGLQLSRSTIIYFKHNDMESLRNTLEKITQ
ENKRAKKLRRYIVVEAVYQNSGQVAPLDEIIKLKEKYRFRVLLDESNSLGVLGGSGKGLT
EHCNVPVDKIDIIIAAMGHALATEGGFCTGSTRVIDHQRLSSSGYVFSASLPPYLASAAI
KAFDILEENPDLITKLRENIKMLFKDLSDIKGLEIVSDPLSPIVFLRLKKSTGSSNSDLK
LLEDIADRVLKEDSVFVVTSKRSTLDKCKLPVGLRLFVSAGHSESDMKKASESLKRVAAS
LLTDQS

Transcript Sequence

Gene sequence data has not been registered.